I have a stock 06. No electronics, just exhaust and intake. The truck runs good. It just seems to smoke a little more. This is my first Cummins. I now have 56,000 miles on it and bought it new. I can start it up after it sitting all night and I get a small puff and thats it. I them back out and go to pull out of my drive way and you can see a little black smoke till the turbo comes up. It seems like this is normal, but I just don't remember it doing this when new. I also notice it will blow a puff of smoke it I put my foot in it hard to get around someone. I don't drive it hard at all, I also wait to get up to temp before I drive hard. This might just be in my head, the MPG'S are good.