Each truck responds a little differently. I see you live in NV and more than likely will be towing in the mountains? If so you might have some problems with EGT's but with a manual transmission you could always pull down another gear to keep you out of trouble. If the temps get too high then start on better air flow into the engine and if still problems a free flowing 4" or eliminate muffler on your stock 3" exhaust.
What ever you do gauges should be first, EGT, boost, and fuel pressure (auto transmission should have transmission temp gauge). Any time you add more fuel (injectors, box) you need more air to burn it and help keep EGT's down, you will have to disable the waste gate.
If it was me with the manual transmission truck liveing where you do I would go for the stage II injectors and just disable the wastegate, you should have plenty of power, if you still don't have enough power than I would get the comp box (only a few more bucks than the EZ) and you can adjust the fueling to your needs, be it EGT's or power, or a combination of both.
Hope this helps,
Ron