Chris:
Remove the tapped wire at IP, for inspection your prognosis could be correct. Also disconnect the map sensor etc. and go back to stock. If prob goes away its the "box" or the "box" harness or connection points at IP.
Map, IAT and OR APPS can also cause these symptoms.
If you are comfortable doing elec. tests ck. for 12v @ pin 7 (Red w light green tracer) at IP connector harness and a for good grnd. ( 0. 0 to 0. 3 volts)at Pin 6 (black wire w/tan tracer). ECM (VIA PIN 36) provides 12v via the relay (pin 86) in the PDC which allows relay to close and complete the circuit.
Pin 30 of the relay goes to B+, Pin "87" of the relay goes to the IP connector Pin 7.
If you can't replicate the surging with it idling take it for a ride with added DMM/Voltage meter leads, if you back track to the ECM for providing intermittant voltage to the relay, this may be cause for ECM replacement.
The cheapest ones are found at ECM rebuilders (1200 from Cummins and 680 from Dodge). If you get stuck I can get you one. . send me a PM
The Dodge DRBIII scan tool can "do some bidirection testing to further confirm" a suspect ECM.
I haven't changed any ECM's (98-02) in a long time, but maybe due to heat and time the drivers seem to be failing internally, the last couple of mos.
It might be necessary to remove the IP and re-solder the wire w/heat shrink etc.
See P 8W 80 40 & P 8W 80 42 in your FSM (factory service manual)