I think a simple explaination of what the box is doing will solidify the NO answer. You are installing the box inline with the engines computer. The engine computer reads all of its inputs and sends out the command signals, including figuring the overhead fuel milage. The box intercepts these signals and alters them as they go to the fuel system. The overhead reads pre-altered signals, the engine squirts more fuel based on post altered signals. The overhead has no way of calculating correctly as it doesn't get the right info anymore. Obviously the lower settings change it less as less extra fuel is used.
I am considering the VA box since I don't like the extra rail pressure idea. I want my overhead to remain correct as well but accept it is something you must give up for now. Maybe some manufacturer will correct for this but I doubt the demand is too high.