Good points all, especially protecting the open filter bowl from contamination.
-Draining the housing completely removes all water, and most contaminants. Best time to get rid of this is at the filter change.
-If you were to leave the old fuel you run the risk of contaminating the clean side of the filter. When you draw the filer cap out it will be dripping non-filtered fuel.
-The general consensus is that you do NOT wipe the inside of the filter bowl. Too risky. Even tiny bits of lint/debris from the cloth will clog injectors.
-I'll never understand the recommended interval in the manual. Way too long. A cynic might think DC wants the engine to fail. I change mine (7 micron Fleetguard "premium" filter from Genos) at 10k as per TDR consensus. Mine is always black. California has been running ULSD for about 2 years now, and my engine has never seen anything but ULSD.
-Theory is that the filters clean better as they get dirty, 10k seems like a fairly safe interval, not overdoing it.
-This is one job that all CTD owners absolutely need to know "how to" DIY. Do it once and your as good as a pro, also save yourself about $150.
-Carry a spare fuel filter, 6-point socket and wrench at all times. Genos sells a nice low-profile 6-point socket for the fuel filter cap.