I'll offer my thoughts as well, since we're all making inferences from what we've read
remember that the motivation for the 325/600 was primarly emissions, and then HP. very significant changes to the fuel injection event to control NOx -- there is a very late and large fuel charge I believe. The other emission related change is the oxidation catylist (soot collector).
covering both the emissions control (soot) and the HP goal is the turbocharger. there are some temp sensors there which I believe are inputs to the ECM so that it knows how to control the wastegate. I understand that the exhaust housing is a tiny bit larger. EGT control of course.
And of course support for the additional HP has to come from fuel, so they dialed up whatever fuel charge they needed to win the HP race and still meet emissions. pretty cool if you ask me -- watching the HP race. Since the 5. 9L engine itself is used in commercial applications at higher power outputs than the RAM, all they have to do to stay in the HP race is dial up whatever they need, and then make it work in the truck.
So its hard to say exactly what yielded the extra power because both the HP and emissions goals were met at the same time, with the primary changes motivated from emissions.
The interesting thing to me is the NV5600. New Venture claims this is a 550 ft lb component and (they told me personally) that they were not asked to increase the rating on it. what that tells me is that Dodge has done testing themselves and found it worthy of 600 ft lbs. not surprising; the thing is a beast, at 200 lbs more in weight than the 48RE. And consider that there are many bombed trucks out there with the 5600 running 1000 ft lbs. I have yet to hear of a bomb-related NV5600 failure (am I not paying attention?... ).
As for the 48RE, I think this puppy was designed long ago to keep pace with the HP race. my guess is that Dodge will use it without any further power handling mods, unless the new tow/haul mode mechanism is a contribution in that regard. of course, if they support an exhaust brake that means there's additional capability there, but not in the area of handling additional input torque.