If it were me, and I have been in your position more than I care to admit, I would run the additive throught the tank like the good pastor said, except I'd run double what the label recommended for the first tank, it wont hurt anything. If that dont help, pull your injectors and have them pop tested. They could be worn, or carboned up, either of which can be remedied by cleaning and resetting the pop pressures. Most Bosch certified shops can do this for what I consider reasonable. One thing I will add is, if you need one new tip, you need six. If you have one new tip, and 5 old ones, that throws the set out of balance, as the old ones have an effective 200K of honing, so to speak, and will flow more fuel per stroke. Or is there a way to offset this, too, Pastor? This is by my experience with one shop here in the swamp. If you need new tips, at $35-45 a piece, you may as well get new performance injectors.
If the injectors check out ok, and are somewhat even, then it could well be the pump wearing down. Next step would be a timing check, and make sure you find TRUE tdc by one of a few methods out there. The timing pin is to be used for a guide to get close, until proven accurate. It is good enough for valve adjustments, but for timing, you need to be dead on. Or it could be the weight of your foot. Some of us here have a tendency to use the torque all the time.

takes fuel to make power and use it... .
Check your lift pump pressure for kicks and giggles while you're under the hood. If the LP aint doing its job, it creates lower pressure one down the line, and fuel wont atomize properly.
I agree, with your 3. 07s, and I assume no OD, you are turning close to the same RPM as I am with my 4. 10s and OD. I get 19 locally, 60% city/40% hwy. I got 21-22 in Colo; 23 hwy @65-58. been a few miles since then, though. 15 is what I get pulling 12K of hay, livestock, etc.
Daniel