First off , there are no dumb questions. . Hopefully we can help.
In the pre-heat cycle the Cummins uses a "grid heater" in the intake manifold to heat the incoming air and aid in starting. The Cummins engines do not require glowplugs as they are direct injection engines unlike early Frods, and Shuffys. Also the pump timing is altered to allow easy starting with the KSB Solenoid.
As for the rough start, timing is the issue. Now that can be the actual pump timing or that the KSB is not properly functioning.
I have the same problem with rough running until warm, I believe mine to be absolute timing as it has never been adjusted and my old 89 was out by 5° at 180,000 Km. After the tuneup it ran like a top.
Also the rough idle might get smoother with a valve adjustment. Helped mine a bit.
Hope that helps. .
J-eh