Don't blame a box that gives you the option of going over what a stock engine can handle. The instructions say not to go over a total of (6) hp/tq on a stock truck. If you go over, you risk many problems.
It's a known fact that the small stock turbo with it's quick-spool characteristics (emissions) will twist off the shaft on a hard accel/decel.
Also. . right from TST...
"Exhaust temperatures will limit towing total wheel horsepower to about 340 to 360 wheel horsepower (power levels settings 3 to 6). Larger turbos are the only thing we have found to reduce exhaust temperatures such that more towing power can be used (maybe 20 to 40 more horsepower), but larger turbos typically have surge problems at lower engine speeds and high altitudes loosing some of the gains. Twin series turbos are the only setup that keeps exhaust temperatures safe with the PMCR on its top setting, however these are expensive and would typically require studding of the head to keep head gaskets from leaking. "